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SRX13773715: DNA based WGA of Zeugodacus cucurbitae
1 OXFORD_NANOPORE (MinION) run: 500,157 spots, 232M bases, 203.8Mb downloads

Design: MinION sequencing of DNA/cDNA based WGA products
Submitted by: (Agroscope)
Study: Genome based identification and characterization of invasive crop pests
PRJNA783774 • SRP351097 • All experiments • All runs
show Abstracthide Abstract
We developed a whole genome amplification based workflow enabling to identify insects and other pests and pathogens to the species level based on any genetic fragment for which reference sequences exist. The workflow is based on nanopore sequencing and uses a commercial software package for semi-automated data analysis.
Sample: 04_200424_DNA_QM_02
SAMN23453450 • SRS11327642 • All experiments • All runs
Organism: Zeugodacus cucurbitae
Library:
Name: 04_200424_DNA_QM_02
Instrument: MinION
Strategy: WGA
Source: GENOMIC
Selection: RANDOM PCR
Layout: SINGLE
Runs: 1 run, 500,157 spots, 232M bases, 203.8Mb
Run# of Spots# of BasesSizePublished
SRR17604920500,157232M203.8Mb2022-06-30

ID:
19165949

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